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Virtualbox images

BioLinux

EMBNet Biolinux Image
BioLinux 8 Latest
Bio-Linux is a fully featured, powerful, configurable and easy to maintain bioinformatics workstation. Bio-Linux provides more than 500 bioinformatics programs on an Ubuntu Linux base. There is a graphical menu for bioinformatics programs, as well as easy access to the Bio-Linux bioinformatics documentation system and sample data useful for testing programs.

RSAT

RSAT Ubuntu 14 Desktop Image
RSAT Ubuntu 14 Server Image
RSAT offers a series of tools dedicated to the detection of regulatory signals in non-coding sequences. The only input required is a list of genes of interest (e.g. a family of co-regulated genes). From this information, you can retrieve the upstream sequences over a desired distance, discover putative regulatory signals, search the matching positions for these signals in your original dataset or in whole genomes, and display the results graphically in the form of a feature map.

About RSAT Image: Please click here to get installation guidelines.

Chipster

Chipster Image
Chipster is a user-friendly analysis software for high-throughput data. It contains over 300 analysis tools for next generation sequencing (NGS), microarray, proteomics and sequence data. Users can save and share automatic analysis workflows, and visualize data interactively using a built-in genome browser and many other visualizations.

About Chipster Image: Please click here to get installation guidelines.

GMOD in a Box

GMOD in a Box
GMOD in a Box is a GMOD virtual server equipped with a suite of preconfigured GMOD components, including a Chado database, GBrowse2, JBrowse, Tripal, and Apollo or WebApollo. Setting up a GMOD in a Box instance is quick and easy; it even comes with demo data to explore if you do not have your own. If you are investigating GMOD for the first time, GMOD in a Box provides an excellent way to assess GMOD components without having to do any installation; for longer-term uses, the virtual server can be kept running as long as required, and data can easily be moved when new versions of GMOD in a Box are released.

About GMOD in a Box Image: Please click here to get installation guidelines.

Utilities

NameUnix 32bitUnix 64bitWindows 32bitWindows 64bitMac OSOther 
Firefox 32UNIX 32bit Bz2UNIX 64bit Bz2Windows 32bit EXE-Mac OS DMG-
Google ChromeUnix 32bit DEB fileUnix 64bit DEB fileWindows 32bit EXEWindows 64bit EXEMac OS DMG-
Java (JRE 7u67 )Linux x86 (gz file)Linux x64 (gz file)Windows x86 (exe file)Windows x86 (exe file)Mac OSX (dmg file)JLinux x86 (rpm file)
Linux x64 (rpm file)
FilezillaUnix i586Unix 64bitWindows 32bitWindows x64OS X 10.7 or newerSources
Sublime Text UNIX 32bitUnix 64bitWindows 32bitWindows 64bitMac OS X-
Virtual BoxUnix 32bitUnix 64bitWindows 32bitWindows 64bitMac OS X-
npp--Windows 32bitWindows 64bit--
Putty--Windows EXEWindows EXE--
Puttygen--Windows EXEWindows EXE--
IGV--Windows 32bitWindows 64bitMac OS X-

Other resources

Looking for other tools? Please take a look to the Other tools section and our Resources page.